rs32820520 SNP Detail

Summary

• ID
  rs32820520
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:129981429 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCCATATAAG GACCTCACAT TGGAAATGTT GAAAGTCACT GTACACAGAC TTTAAACATC
  AATTAAGAAA GGGGTAATTG TTCAAATTCT GAAGCTTATG GTAGGATCAA TGAAAAATAT
  CATCTCTCCT AGTCAGTCAT AGGAGACTTG ATTTGAGATC ATTTTCCAGT CAATGGAAGC
  TTGTAGTTTG AACTTGTTTT CTAGTTGGCA TGACCAAACC CTTCAATAGG TCAGAACCAA
  AAGTCATGGA CTCTAGAATG CTTGTAAGAG GCTCAACATT GACAGTAGGA ATTATAAAAA
  Y
  ACCTATAGCC AATAGTCACA TGAAAAGTTA ATATAAAACT GGAAACAAGT GTACATGTAG
  AGAACACGGC AATGGTATCT GATCAGGACC CTCTTGCTAC ATCATAAGAT GATGAGGGCA
  TCACCTACTG AGACAGGGCA AACGTGATAA TGAGGTTTCT CCACTTGTCC TTATAAATCT
  ACTTGTACCA TCATAGGGAT TCTATTCATG ATCATATCTA AACTCAAGTT ACTGGGCAGG
  TATTGAAAAC TCTGAGCAAG GGCTGGAGAG ATGGCTTGGA AGTTAAGAGC ACTGACTATT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46196334	mCV24003531	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32820520					SNP	T	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:129981429 () rs orientation: forward

Symbol	Name	Function Class
Gm21399	predicted gene, 21399	1354 bp downstream
Gm64945	predicted gene, 64945	1093 bp downstream
Tssr2752	transcription start site region 2752	1975 bp downstream
Tssr2753	transcription start site region 2753	1703 bp downstream