rs32821867 SNP Detail

Summary

• ID
  rs32821867
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:98249190 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGACCCTA GCGAGCCTAT
  GGCTTGGACC CCTCTTGAGC TGAAAGTTGT AAAGATCACA AGGAAAATAA GTTTGAAATA
  ATTTTCCCTC TAGAAGACCT CGACGTCTTT ACTGTCTGTC GGAGTAAAGT AGTAGAGGCG
  TGCCCGATGA TTCAGTTCTC TAGCCTTGGG AGTAGTGGGC GTGCTCAGCA TGGAATCCCA
  R
  CCACCAGCCT GACTCAGGAA AACTGTTTTT CCTTTGCCTG CCTATGTATG TCTGTGCATT
  ATACATGTGT GCCTGGTGCC TGAGTAAAAT CAGATCCCCC GGAATTAGAC TCACAGATGA
  CTGTGAGCTG AGAAACGCAC CCTCTGGAAG AGCAGCCAGT GCTCTTAAAT CTGTGAACCA
  TTCCTCTGAC ACCCCCTCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47218258	NES11217334	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32821867					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47218258	NES11217334	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:98249190 () rs orientation: forward

Symbol	Name	Function Class
Gm47567	predicted gene, 47567	1891 bp downstream
Rr258651	regulatory region 258651	1790 bp distal
Rr258652	regulatory region 258652	611 bp proximal
Rr269018	regulatory region 269018	within coordinates
Rr269908	regulatory region 269908	1834 bp distal
Rr269909	regulatory region 269909	1615 bp proximal
Rr403440	regulatory region 403440	534 bp upstream