rs32822715 SNP Detail

Summary

• ID
  rs32822715
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:46400171 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACACTTACA AAGGTTCCCA
  CCACCACAGG CACCAGCCAG CCGGTATTTC TTCGCAGACT CTGCCCACAC CAATCCTTCA
  GGCCTACCCT CCCCTTCTTT GTGTTTGGTT CACATAGACA GAGGTGACCC GGTATTTCAG
  AATGTTATCG ACACGAAACA TTACAGTCTG TTGGACACAC AGCATGATGT CACATCATAA
  R
  GAAAGGCACC ACACACCAAT GACCCACATG TCCCTGTTCT GAGAATTGAA TCACCTCCAG
  CTTTGGAGCC TGGTACACAG GCACCTCTGT GTGAAAAACA GTGAATAGTC ACTTGGCTCC
  TTCAGTTTGA ACAGTAATAA ACTCTACATA TGCATTTTCC CTTGGCCATC TCTGCAATGT
  ATATACCTTG GGTTATATTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48216975	NES11779580	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	A	A	A	A	A	A	A	G	A	G	A	G
ss149179890	ENSMUSSNP4760532	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A						A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32822715					SNP	A	G	A	A	A	A	A	A	A	A	A	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48216975	NES11779580	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:46400171 () rs orientation: forward

Symbol	Name	Function Class
D7Mit28	DNA segment, Chr 7, Massachusetts Institute of Technology 28	436 bp proximal
Gm74180	predicted gene, 74180	within coordinates
Rr380764	regulatory region 380764	1277 bp downstream
Saa2	serum amyloid A 2	1086 bp upstream
Tssr66700	transcription start site region 66700	1085 bp upstream
Tssr66701	transcription start site region 66701	1606 bp upstream