rs32825508 SNP Detail

Summary

• ID
  rs32825508
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:125433382 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAAACTGATT TGCCAAAGGA ATTCCAGAGA CTTTGGATCT
  GTAAGCTAGA GAAATGCTGA ATGGCTATAG GCAGAGCGCA GTGGGCTATT CTGCTGGGAT
  S
  GTGGGAGGAT AACAGACATG CAGACAGTGA CGTCTGGCTT TCTGGGTTTC AGCAGGCAAC
  TGGACTACAA GGCCATTGCG TAACATTCTA GAAAAGAAT                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45200008	mCV22279533	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	G
ss147482222	ENSMUSSNP4419654	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32825508					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:125433382 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cep152	centrosomal protein 152			Intron
				Noncoding-Transcript-Variant
Gm75597	predicted gene, 75597			115 bp upstream
Rr564236	regulatory region 564236			1073 bp proximal
Tssr19898	transcription start site region 19898			179 bp upstream