rs32825637 SNP Detail

Summary

• ID
  rs32825637
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:61415289 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCAGGAGAG CTCAAGTCCT
  TTCCCTAGGC CCCTCAACAC CCAAGAGGAA AGATCTACTT TTTCTAGCTG CAGCCTGATC
  TCTGTGCGGG TGTCAGAAGC TGGTGGAGAT GAGGCACAGC CCCTGCACTG GCTGACTGTT
  GGCCCTGTGA GCCTCATTTG CTGGGCAGGT TCCAGGCTGC TGTAGGGGAG GCCATGCTGT
  R
  AGCTCCTGGG TCCTCTGCCT GCCTCCTGGG TCCTGGCATC TCCTGGACCC CTCAGTTCAA
  AATGGTATTC TCCCCTATTG CTCCCTGTCT ATGTTGCCTC TGCTTCTGTC TACCTCTGGC
  TGTGAGACTC TAGGAACCCT GGGACCCTTG GGTTTCACCT CTGCCCAACA TGGGTCTTCC
  TATTTCTGTA ACTGGTCAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47718110	NES11297867	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	A	A	A	G	A	A	G	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32825637					SNP	A	A	G	A	A	A	G	A	A	G	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47718110	NES11297867	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:61415289 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21882	CpG island 21882	1655 bp proximal
Rr680558	regulatory region 680558	1226 bp proximal
Rr680559	regulatory region 680559	1727 bp proximal
Tssr85515	transcription start site region 85515	1706 bp upstream