rs32826181 SNP Detail

Summary

• ID
  rs32826181
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:59701842 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAACAGGACA GACACAAATA CCAATACAAA TAATAAAATC
  ATCCTCTCCA ACCTAATAAT TTCAGAGTTC ACACACTTTT ATCCAAAAGG GCCTGAATAT
  Y
  TATAGTTGAT GACCCTTGGC CATGTAAGTA TCTACAACTA AAGGCATTAT TTCTAATTTC
  TGTTAGCCTT AATTCCTTTT TCTGAAAACC AAAATCAAAA                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49404891	NES12789006	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32826181					SNP	C	C	C	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49404891	NES12789006	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:59701842 () rs orientation: forward

Symbol	Name	Function Class
Gm71026	predicted gene, 71026	1145 bp downstream
Rr16806	regulatory region 16806	1042 bp distal
Rr22466	regulatory region 22466	1559 bp proximal
Rr27302	regulatory region 27302	1435 bp distal
Rr371358	regulatory region 371358	820 bp upstream
Sumo1	small ubiquitin-like modifier 1	within coordinates
Tssr11830	transcription start site region 11830	242 bp upstream