rs32827957 SNP Detail

Summary

• ID
  rs32827957
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:36499692 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATTTCAAT TAGGATAGAA
  AGTGGATCTA ATTCAATGCT CTAGTGTAAA AGCCCTATAG GCTCAGCAAT CCCAGCCACT
  CACTGCAGGC TCTCCAAGGA GCTTTTGTGG TGGCAAGCAT TTAGATAAAC TTGAAATCTG
  GACACCTGGG ACTGAAGATC TCATGTTCTG ATTTCTGAGT GGGGCAGGGA CACAATCAGA
  W
  CTTGCCTTAT TGATTTGCCC AAGGTGATAG ATTGCCACAT GTGGATTGTG GCGTTGCTGT
  GCATCTCAGG GTTACTATTA CTGTGGTGAA ACACCATGAC CAAAAGGTAC CTGGGGAGGA
  AAGGGTTCAA ATGGCTTATA CTTCCACATC ACAAATCATC ATCAAAGGAA GTCAGGATAG
  GAATTCAAGC CAGGCAGGAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47219237	NES11101105	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	T	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32827957					SNP	A	A	A	A	A	A	A	A	A	A	T	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47219237	NES11101105	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:36499692 () rs orientation: forward

Symbol	Name	Function Class
Gm33401	predicted gene, 33401	1367 bp upstream
Tssr6266	transcription start site region 6266	1385 bp upstream