rs32831297 SNP Detail

Summary

• ID
  rs32831297
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84625447 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCCGCTCCC CTGAACCCAC ACCCCAACCC CCGCACTGAG
  TTGTCTATAT TGCTTAAGTG CCTGGTTTTG GCCCCGGGTT CAGCTTTATA GCCTCCCCCC
  M
  CCAAAAAAAA AAAAAAAAAC CAAAAAAACA AATAAACTAT AAGTCTAGGC AGTGGTAGCT
  TTGGCTCCAG ATATTTGGGC CAGGTCGACC CCCTTTCCC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J
ss46197734	mCV24180472	ABI	CRAMUS_MOUSE	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J
rs32831297					SNP	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss145367042	ENSMUSSNP5528371	ENSEMBL	ENSEMBL_Sanger	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84625447 () rs orientation: forward

Symbol	Name	Function Class
Adgrl1	adhesion G protein-coupled receptor L1	1287 bp upstream
Cpgi20661	CpG island 20661	1335 bp distal
Cpgi20662	CpG island 20662	567 bp proximal
Gm26721	predicted gene, 26721	within coordinates
Rr186961	regulatory region 186961	within coordinates
Tssr78300	transcription start site region 78300	1140 bp upstream
Tssr78301	transcription start site region 78301	1270 bp upstream
Tssr78302	transcription start site region 78302	1278 bp upstream
Tssr78303	transcription start site region 78303	1296 bp upstream
Tssr78304	transcription start site region 78304	1629 bp upstream
Tssr78305	transcription start site region 78305	1774 bp upstream
Tssr78306	transcription start site region 78306	1802 bp upstream
Tssr78307	transcription start site region 78307	1888 bp upstream