AGAGC CAGGCATCAT CAGGTGGTGC Y ATGAACTCGG GAGAAGCAGG ACACG Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss46197165 | mCV24221117 | ABI | CRAMUS_MOUSE | f | SNP | C | C | T | C | |||||||||||
ss50598763 | NES14052497 | PERLEGEN | MM_PANEL2 | f | SNP | C | T | C | C | T | T | C | C | C | T | C | C | T | C | |
ss145451856 | ENSMUSSNP5208203 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | T | C | ||||||||||||
SNP Consensus Information | ||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
||||
rs32831754 | SNP | C | C | T | C | C | T | T | C | C | C | T | C | C | T | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss50598763 | NES14052497 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr8:88529509 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Tssr82324 | transcription start site region 82324 | 1509 bp downstream | ||||||
Tssr82325 | transcription start site region 82325 | 1530 bp downstream | ||||||
Zfp423 | zinc finger protein 423 | within coordinates |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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