GGTGA TATGGGTTCA GGGTCATGCC Y TCTTCCTCCC CCCATAACCC CTACA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|
ss46197757 | mCV22518709 | ABI | CRAMUS_MOUSE | f | SNP | T | T | C | ||
ss148765701 | ENSMUSSNP6310597 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T | T | |||
ss322521490 | CHEV_8_17331570 | CHEVERUD | SCREENING_POP | f | SNP | C | T | |||
SNP Consensus Information | ||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
LG/J |
SM/J |
||||
rs32832917 | SNP | T | T | C | C | T |
Location: Chr8:17381586 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Csmd1 | CUB and Sushi multiple domains 1 | within coordinates | ||||||
Tssr80508 | transcription start site region 80508 | 1739 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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