rs32833025 SNP Detail

Summary

• ID
  rs32833025
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:36567382 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTGGCCGT CCTGAAACTC
  ACTCTGTAGA CCAGGCTGGC ATTGAACTCA GAAATCCACC TGCCTCTGCC TCCCAAGTGC
  TGGAATTAAA GGCGTGTGCC ACCACTGCCC GGCCTGATTA AATTCATTTT TATCAAATTT
  TCCATTGTAC TTTTACCATA TCTGTCTCAA TTGCCTTTCT TCCTAATAGT TTGTTTTACA
  Y
  GTAAGCTTGT GGTCCATTTT GAAATATTGT TTCTTTAAAT AAGGCTTGGG TCCTAGCTGG
  TTTTTGTATG TGTGTGTTTT TCATGTCTGT GCTTAGTGCC TGCAGAGGCC AGCAGACGTT
  GGCTCCTTCT GGACCTGGAT CCTTTGGAAG AGCTGGGGGA CAGCTGGTGA CTTGCAAAAC
  TTAAACTCTT GGCCCTTTGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47219936	NES11097099	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32833025					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47219936	NES11097099	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:36567382 () rs orientation: forward

Symbol	Name	Function Class
Ankrd23	ankyrin repeat domain 23	1887 bp downstream
Cnnm3	cyclin M3	64 bp downstream
Gm38033	predicted gene, 38033	64 bp upstream
Gm42417	predicted gene, 42417	1892 bp downstream
Rr409335	regulatory region 409335	within coordinates