rs32833440 SNP Detail

Summary

• ID
  rs32833440
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:36544996 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATTCTGGG CCAGTATGTC
  TCTGACTTCA GTGTGCGGGC GCTCACGGAC CTGCAGTACA TTAAGGTAAG AACTTCTCAT
  TTCCCACCTC TGCTGGCCCA CCTTGCGCAC GTACATGGCT CTGTTCTGGA GGCAGTGTGG
  CCACTCCAAA CCCGAGTCTC TTACCTGCCA GGCCAGCACC TCACCACAGA ACTACATTCC
  Y
  TTTTTGCTTT GTAGTTTTGT TTTCTTGAGA TACAGAGTGA CTGTGTAGGC CAGGCTGGCC
  ACAAGCTCTG AAAACCACCT CCTGAGTGCA GCCTCCTGAG TGCTGGGAGT CGGGACATTT
  ACCTTCACGC CTGGCCTACA ACAATTTAAT GATGATGATG ATGGCGTATA TCCGAGTGTG
  TGTGAGTGTG TGTGTGTGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47219753	NES11098519	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32833440					SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47219753	NES11098519	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:36544996 () rs orientation: forward

Symbol	Name	Function Class
Cnnm4	cyclin M4	within coordinates
Gm56056	predicted gene, 56056	647 bp upstream
Tssr6270	transcription start site region 6270	943 bp upstream