rs32833518 SNP Detail

Summary

• ID
  rs32833518
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185416037 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACACACACCA CACACACACA CACAGTTTTT GAGGAAGACT
  GAGGCCTCTG GAATTGTGGA ACTAAGAACC TACCTTCTCA TTCAAAAACT TTTTCTGTTC
  Y
  TCACGTATGT TTTCCTCCCT CGCCCTTCTC ATTTCTTTCC CCACAATTAC CAAAGTCTCT
  TCTTACAATT CCTGCTTGAT AGTGATTTAA GAACACTTA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	PWD/PhJ	SM/J	WSB/EiJ
ss46734712	NES10661011	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	C	T	C		C		C
ss320178624	CHEV_1_187507719	CHEVERUD	SCREENING_POP	f	SNP							T		C
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	PWD/PhJ	SM/J	WSB/EiJ
rs32833518					SNP	T	T	T	C	T	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46734712	NES10661011	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185416037 () rs orientation: forward

Symbol	Name	Function Class
Rr425420	regulatory region 425420	1280 bp distal
Rr425421	regulatory region 425421	1732 bp distal
Rr425422	regulatory region 425422	958 bp proximal
Rr425423	regulatory region 425423	1146 bp proximal