rs32833904 SNP Detail

Summary

• ID
  rs32833904
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:36568168 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCTGGTCT ACAAAGTGAG
  CTCCAGGAGA GCCAGGGCTA TACAGAGAAA CCCTGTCTCA GAAGAAAAAA AAAAAAAAAA
  AAAAAAAAGG GAGGGGACAG CCTGTGGGCC AAGCTGACCT CAGAGTGCCC TGCCTCAGCC
  TCCCAGATGC TGAGATTACA AGCATGAGAC CCATACCTGC CTTTTAGTTC CTTTTTTCTT
  Y
  TTAAGTCTCA CGCAGTTCAA CCTAGACAGG AACTCAAAGT AATCCGAGTC CTCTCAAGTG
  CTGGGAGATA TATATATATG TATGTATGTA TGTATGTATA TATATATATA TACACACATA
  TACACACATA CATATATATG AAGGAACCAC ATATGGTTCA GATTGTTTGG GGTATACACT
  TGCTTACAAA GTTTAGAAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47219945	NES11097025	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32833904					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47219945	NES11097025	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:36568168 () rs orientation: forward

Symbol	Name	Function Class
Ankrd23	ankyrin repeat domain 23	1101 bp downstream
Cnnm3	cyclin M3	850 bp downstream
Gm38033	predicted gene, 38033	850 bp upstream
Gm42417	predicted gene, 42417	1106 bp downstream
Rr409335	regulatory region 409335	360 bp distal