rs32834838 SNP Detail

Summary

• ID
  rs32834838
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:36546095 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTGTTGGG TTGTTGTTGG
  TTTTTTTTTT TTTTTTTTTT TTTTTTAAAC ACTGAGAGAA GTTTTAAGCT AGGCTCATTG
  CTCCTCTTTT AAAATATCAT TTGGGGAAGG GAAGACAGGG TTAAGGAACT TTATGTAAAA
  AAAAAAAAAT TTTTTTTTTC AAGAAGCCCC ACAGACTTTA AAAGGGGAGG AGGGTTCTTC
  R
  CCCCGGGAAG CAATGGCCAT AGCCTGTTTC CAGCTGAGAC CTTGCAGCCT GTGTCTGTCA
  CTCTAGGAGG CACTCTTCTG CAGCAGTGGG GGCCTGGAGC CCACAGGAGG GGCTTCCTGG
  GAGGAAAATG ACATCAACTG CGGGACACAC GGGCTGAGGT CATAGAGAAG TGCCGAGCAA
  CGCATCAGGG ATGCGATGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47219765	NES11098454	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32834838					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47219765	NES11098454	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:36546095 () rs orientation: forward

Symbol	Name	Function Class
Cnnm4	cyclin M4	within coordinates
Gm56056	predicted gene, 56056	312 bp downstream
Rr409327	regulatory region 409327	1220 bp proximal
Tssr6270	transcription start site region 6270	152 bp downstream