rs32837952 SNP Detail

Summary

• ID
  rs32837952
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:36599509 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCGTGATTC ATGCTTTTTA
  ATAAAAGGAC AGCTGGCAGA AAAAAATAAG GATCCTGGAT TGTCCATCAA GAAAAAAATA
  CAGTAATACA GAAAAAAAAA TTGCAAAAAC ATCTTCCAGG CCTGCCTAGC ATAGGCTATG
  GAAGACATCA CACCCGTCAT CTGTATTCAG GCAGACAGAA TAAGGGCTTC CCTAACTTGC
  Y
  TCTTTTGCTA CGGCTTAAAG CCTTTTAGCC AAATAAAGGA AACACAAGAA GATATGTTAC
  ATGCCTCCCA GGCGCTGGAG CCAACCCTCA CAGATCCCAG TACATGAGTA GTATCCGTAG
  TATCCTGCTT TTTTTTTTCG GTTTTTTTGA GACAGGGTTT CTCTGTGTAT CCCTGGCTGT
  CCTGGAACTC TCTTTGTAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47220410	NES11095701	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32837952					SNP	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47220410	NES11095701	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:36599509 () rs orientation: forward

Symbol	Name	Function Class
Cpgi148	CpG island 148	1502 bp distal
D430040D24Rik	RIKEN cDNA D430040D24 gene	within coordinates
Rr409353	regulatory region 409353	841 bp distal
Rr409354	regulatory region 409354	391 bp proximal
Rr409355	regulatory region 409355	843 bp proximal