rs32838317 SNP Detail

Summary

• ID
  rs32838317
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:117912515 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGGTG CTAGGGACCA GCCTGAGGGC
  R
  CTGCGCATAA TAAGCTTCTC TGGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45701523	mCV24294419	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss147298650	ENSMUSSNP6552345	ENSEMBL	ENSEMBL_Sanger	f	SNP	G			G
ss321281386	CHEV_4_117727923	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32838317					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:117912515 () rs orientation: forward

Symbol	Name	Function Class
Rr598293	regulatory region 598293	1078 bp distal
Rr598294	regulatory region 598294	277 bp distal
Rr598295	regulatory region 598295	1888 bp proximal
St3gal3	ST3 beta-galactoside alpha-2,3-sialyltransferase 3	within coordinates
Tssr43029	transcription start site region 43029	563 bp upstream