rs32838955 SNP Detail

Summary

• ID
  rs32838955
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:36600115 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCACTGGTG GCTGAGTGAA
  AAGATTAGGG TCGGCCATTT TTCAAGGAGC TCTCTGACCA CTGGGACCCA GGGCACTGGG
  TCATAGGAAA AGGACTTCCT CCAAAAGGAC AATTATCAAA GCTGTCCACC TGGGAAGCCC
  CTCCCTTCCC GGCCCCTCCC TTCCAGCATC ACCAAAAGGA AGCAGGAAAA CATCCGTCAT
  Y
  GAGGCCCAGG ATGCGGCTTT TCCAGTGGCT TTGTCAGGAT ATCCCTTGCC TTTTCCCCAG
  GGCTTGGGGT CAAAAACCTG GAGGGCAAAC GGTGAGCCAG CTAGCTTCGG TCCAGAATTC
  TTGGCCTTGA AAAGGCTCGG TTCCTATTAT GTCAGCTCCC AGTGAGTCCC AGAGCAGGGC
  AATTACAGGA CCCAGGGGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47220413	NES11095213	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32838955					SNP	T	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47220413	NES11095213	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:36600115 () rs orientation: forward

Symbol	Name	Function Class
D430040D24Rik	RIKEN cDNA D430040D24 gene	within coordinates
Fam178b	family with sequence similarity 178, member B	1658 bp downstream
Rr409353	regulatory region 409353	1447 bp distal
Rr409354	regulatory region 409354	within coordinates
Rr409355	regulatory region 409355	237 bp proximal
Rr409356	regulatory region 409356	1810 bp proximal