rs32839304 SNP Detail

Summary

• ID
  rs32839304
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:36631401 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAGTCAATC AGGTGAAGAT
  AGGGGAATGA AGCCTCTCCA GGAAACCAGA AGCAGACACT CAGTATAAGT TCAGATGGCT
  GCACAGTTTT AGGATGTGGC AGATATGAGG GCATCCACAG GGGATGGGGG ACAGGAATGG
  CAGGGGACAG GAATGGCGGA GCACAGGTAC AAGTTTGAGA GAGGTGGTAT GAAAGAGTAA
  R
  GCAAAAGGCC CCACAACACT AGCTGGGCTG CTTGAAAGTT ATACCAAGGG TAAGAATTTT
  TTTAAAAATT CTTTATTTTC TGTATGAGAG TGTTGAACCT ACATTTAATG TATGTGCCCA
  CATGTGTGCT TAGTTCTCCA ACGGATCAGA AGACCTCTGG TGCTGATACT AGAAAAAAAG
  CTGTGTGGGT GCTGGGACAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47221124	NES11093604	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32839304					SNP	A	A	A	A	A	A	G	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47221124	NES11093604	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:36631401 () rs orientation: forward

Symbol	Name	Function Class
Fam178b	family with sequence similarity 178, member B	within coordinates
Tssr11268	transcription start site region 11268	995 bp downstream