rs32840224 SNP Detail

Summary

• ID
  rs32840224
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:36631984 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGGTCTCC AGGAAGAACT
  GCAGGGTACT GGAGTGCAGC CTTATCCAGG AAAGAACTGT CAAGATATGG AACTAGGGGT
  CTAGTGGGAA GGAAGTGGCA TTGTGGGGGC AGGAGTGGAG AGACACTGCC GTTTGCTGGC
  AGTGGGACAC TTCAACAGCG CTTGTTCGTG GTGTTGGGAT TGCCGAGGGC CTGGAAAAGG
  Y
  TGGCTAGCAG CCCACAGAGT GGGAGCCTGA AGGGGTCAAG GCTCCAGTTC ACAAGGCCAC
  CCCGTTTCAG GGCAGGTAAG TCTAAAGTGG ACGCAAGGAG GCATTGAACA GTGGCAAGAG
  GTGCAGTACC TGAGCTAGAA CCTGAGTGTT GTGTGGAGCT GAAAGAAGCA AATGTGGGCC
  CTCTGGTCCC ACTGCAGACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47221136	NES11093421	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32840224					SNP	C	C	C	C	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47221136	NES11093421	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:36631984 () rs orientation: forward

Symbol	Name	Function Class
Fam178b	family with sequence similarity 178, member B	within coordinates
Tssr11268	transcription start site region 11268	412 bp downstream