rs32841374 SNP Detail

Summary

• ID
  rs32841374
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:86675523 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCACCCTC GGATTCCAGT
  GACCACTGTA AACCAAGTCA TTTCAAACAA AAGGCCATAT TGAATTCCTG TCTTTATTGT
  CCAGTGTGCA CAGTAACAAC TACTAAGTCA ATGCCAGAGT GAAGGAAGAA GAGAGTGGGC
  AGCGGGGTGT GCTGATTACA ATCACAGAGC CATCCATTAA GCAATTTGTG GGAAGAAGTG
  M
  TTTTGCATTT CTGAGACTAA GCACAGGAAG GTGCAGAGCC AGCATCCTCT AACAGCTAGA
  TGCTGTTAGA GAGAAGCATG GTGTGTGCCT GCTGAGGTGG CACACGTGTT GCAAAGGGCT
  GCTCAGTCAC TCTGAAATGG CTTCACTTTC ACAGCCTGGG TTGGTGATGC TGCTGATAGC
  AGGAACATAT TACACTTTTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46735397	NES10754593	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	A	C	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32841374					SNP	C	C	C	C	C	C	C	C	C	A	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46735397	NES10754593	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86675523 () rs orientation: forward

Symbol	Name	Function Class
Gm37876	predicted gene, 37876	within coordinates
Lrba	LPS-responsive beige-like anchor	Intron
Rr579374	regulatory region 579374	396 bp proximal