rs32841380 SNP Detail

Summary

• ID
  rs32841380
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:86675678 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACAATCAC AGAGCCATCC
  ATTAAGCAAT TTGTGGGAAG AAGTGCTTTT GCATTTCTGA GACTAAGCAC AGGAAGGTGC
  AGAGCCAGCA TCCTCTAACA GCTAGATGCT GTTAGAGAGA AGCATGGTGT GTGCCTGCTG
  AGGTGGCACA CGTGTTGCAA AGGGCTGCTC AGTCACTCTG AAATGGCTTC ACTTTCACAG
  Y
  CTGGGTTGGT GATGCTGCTG ATAGCAGGAA CATATTACAC TTTTTAAAAA TAACTGAAAA
  GTGTATTTCT ACATGGATTA TTTATCTCCT GTGCCTTAAC GGAGGTAAAT CTTGGAAATT
  ATCTCTCTCA TCTCCTACTT ATGAATAAGA TAGTAGAGGA ATTACTTTTT CTCTTTTAGA
  TATGAAATTT TAAGAGGTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46735403	NES10754595	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	T	C	C	C	T	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32841380					SNP	C	C	C	C	C	T	C	C	C	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46735403	NES10754595	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86675678 () rs orientation: forward

Symbol	Name	Function Class
Gm37876	predicted gene, 37876	within coordinates
Lrba	LPS-responsive beige-like anchor	Intron
Rr579374	regulatory region 579374	241 bp proximal