rs32842118 SNP Detail

Summary

• ID
  rs32842118
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:39111684 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTTTCCT TTTAAAAAAA
  AAATTACACC ATAACAGTGA CTATTAGTAG TCACAAAATT CCATTCTCTT TTTATGGGAG
  AACTGAACTT GACTGAAAAA AAAAATCTAT TATTAGCCTG CACTCATTCA CTTCTTTAGG
  TATCCTGACA GGTCTCACAC AAACCAGGTC AGTCTATTAT AGAAGTGTAC TTTAAGACTC
  R
  GGAGATGGTT CAGTTGTGTA ACAGCATTTG CCATGCAAAT TTAGGAACCT GAGCTTGAAC
  CCAGAAAGCC AGTCAAAGTT ATTGAACTTG TAATCCAGTG CCTCTTCAGC AAGATTACAG
  GCATAGGCAG GAAAATCTCC GGAAGCTCAT AGGCAGGTTC CTTTGGTGAA CACAACACAG
  TGGTAAGAAA CACATATACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45701367	mCV24881622	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss146206735	ENSMUSSNP5111791	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss321089530	CHEV_4_39058717	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs32842118					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:39111684 () rs orientation: forward

Symbol	Name	Function Class
D4Mit236	DNA segment, Chr 4, Massachusetts Institute of Technology 236	260 bp proximal