rs32842685 SNP Detail

Summary

• ID
  rs32842685
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:130896690 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTGA GGTTAGCCAC ACAGCCCTCA
  R
  GATGTGCTGT TTCTTTCTAA GCTAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45201274	mCV22650366	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss147597918	ENSMUSSNP6510469	ENSEMBL	ENSEMBL_Sanger	f	SNP	A			G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32842685					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:130896690 () rs orientation: forward

Symbol	Name	Function Class
Adam33	a disintegrin and metallopeptidase domain 33	within coordinates
Cpgi12279	CpG island 12279	within coordinates
Rr565170	regulatory region 565170	542 bp proximal
Rr565171	regulatory region 565171	1002 bp proximal
Rr565172	regulatory region 565172	1603 bp proximal
Tssr26331	transcription start site region 26331	217 bp upstream
Tssr26332	transcription start site region 26332	1056 bp downstream
Tssr26333	transcription start site region 26333	1795 bp downstream
Tssr26334	transcription start site region 26334	1811 bp downstream