rs32842725 SNP Detail

Summary

• ID
  rs32842725
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:86676647 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATCTGTTG TGCTTTATGG
  TCTGGGCTTT GGTAGATCCT AGCTCCTACT CTCTGAGAGA GCAAAGGTAC AGACTGTCAG
  CATCCATTAA CAGTCGGAGG TTTTCATCCA AAGGATAACA TGGTACTTTC CAGAAGACTT
  TCCCTGCTCT TTAAGTGAGG CTGGTGGTGC CTGCAGGATC TGAAGGGAAT GCACGTGTAG
  R
  ATCATCTTAT TTGTACTGAT GCGCCCCCAC CCCCAAGTCA TCCTGGTGTG AGCTGACAAG
  TGGGCAGGAG GGGCAGCTCT GGAGCTGACT GGAGCTTTAG CCACTGCCAT TTGCTCTTGC
  CTTTTCACGC CGAGGCACAA GGGGTCTTGC TTTCTTCTTT GTATGATGAT GTCACCTGGC
  ACCTGTACAA CCCAGGAGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46735418	NES10754600	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32842725					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46735418	NES10754600	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:86676647 () rs orientation: forward

Symbol	Name	Function Class
Gm37876	predicted gene, 37876	within coordinates
Lrba	LPS-responsive beige-like anchor	Intron
Rr579374	regulatory region 579374	353 bp distal