rs32842879 SNP Detail

Summary

• ID
  rs32842879
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:20646578 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGAAACAGTA TTGGAAGTGC GTGGCAGGTG AATATTACGA CACTGAGACA ATTCTCTTAG
  CCTGTCCATG AGAACAGTGG TCATGTATAT GTGTAGTGGG CATCATGAAA ACTAGTTTAC
  CATTAGCTTA TGTTCTGTAT ATTTACTTTA CAGTGTAATC TTTTTCCCTC TCCAAGGTAT
  AGCAAAGTTA TAGAAATCAT TGTATTACCC TTCAAACACA CTGCTTTGGA AGCCAGCATT
  TAGGACAGAT TTTTTTTTCC CTAGGGCAAT GAAATGCAGG CTGTGCGTGC GCGCGCGCAC
  R
  CACACACACA CACACACACA CACACACACA ACAAATACAC AACACACACA CACACCCCTA
  TATCTCCTCA CCTCACAAAG GAAAGCCATG ACAAACCAAA GTATCAGCGA GTTTTTATTG
  GGATTACTAA AGGGACTAGG GTGAGGGGTT GCTTACAAGA GCAGGGATGA CTCAAAAGCA
  GCTGCATCCC GGAAAGCCGT CCCTGGCACT GGGGAGGACT CAGGCAAGAT GCAGCCCTGG
  GGTTCTCAGC ACAGCTTGCA GGCAAGAGAT TGTTGTCCAA GAGATCACCT ACGCCTATAA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45202238	mCV25435213	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32842879					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:20646578 () rs orientation: forward

Symbol	Name	Function Class
Etl4	enhancer trap locus 4	within coordinates
Rr366849	regulatory region 366849	within coordinates