rs32846547 SNP Detail

Summary

• ID
  rs32846547
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:73073371 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGGA TTGGACGGTC TGGGCGCCGA
  R
  AATCCTCCCG AGCCCCCGCC GCAGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
ss46199667	mCV23344032	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss322708336	CHEV_8_74843426	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	LG/J	SM/J
rs32846547					SNP	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:73073371 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20584	CpG island 20584	within coordinates
Gm63983	predicted gene, 63983	1668 bp upstream
Klf2	Kruppel-like transcription factor 2 (lung)	Coding-Synonymous
Rr382265	regulatory region 382265	1854 bp downstream
Rr400967	regulatory region 400967	400 bp downstream
Rr665300	regulatory region 665300	1679 bp distal
Rr665301	regulatory region 665301	1178 bp distal
Rr665302	regulatory region 665302	484 bp distal
Tssr2606	transcription start site region 2606	619 bp upstream
Tssr77968	transcription start site region 77968	635 bp downstream
Tssr77969	transcription start site region 77969	612 bp downstream
Tssr77970	transcription start site region 77970	456 bp downstream
Tssr77971	transcription start site region 77971	6 bp upstream
Tssr77972	transcription start site region 77972	56 bp upstream
Tssr77973	transcription start site region 77973	93 bp upstream
Tssr77974	transcription start site region 77974	149 bp upstream
Tssr77975	transcription start site region 77975	299 bp upstream
Tssr77976	transcription start site region 77976	538 bp upstream