rs32846569 SNP Detail

Summary

• ID
  rs32846569
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:152238017 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAGG CTATTGGAGA GACGCTCCAG
  M
  GCCTTCGTGC AAAGAATCGC TATTG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	WSB/EiJ
ss46736862	NES10986632	PERLEGEN	MM_PANEL2	f	SNP	C	A	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	WSB/EiJ
rs32846569					SNP	C	A	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46736862	NES10986632	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152238017 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15395	CpG island 15395	1006 bp distal
Cpgi15396	CpG island 15396	within coordinates
Espn	espin	1189 bp upstream
Rr398896	regulatory region 398896	220 bp upstream
Rr605762	regulatory region 605762	839 bp distal
Rr605763	regulatory region 605763	719 bp distal
Rr605764	regulatory region 605764	within coordinates
Rr605765	regulatory region 605765	410 bp proximal
Rr605766	regulatory region 605766	1626 bp proximal
Rr605767	regulatory region 605767	1938 bp proximal
Tssr44823	transcription start site region 44823	1163 bp upstream