rs32846962 SNP Detail

Summary

• ID
  rs32846962
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:48340838 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGAGGGATA GTTGAGAGAA CTGAGGAGAG TAATCAGGGT
  ATATTGTGGC ATAAAGGGAA TTATCAAAGA AAGCAATTAA TCAATATTGA ATGCCCGGGG
  M
  AGAGCACAGG GACCCTGTAA TCACAGCAAT AGCCAGCTCT GAGTACAGAT GACATCCACT
  TTACTACAAT TAATAAGGCT CCATATTCTG TGATATTGGG                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss48220976	NES11805110	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	A	A	A	C	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs32846962					SNP	C	C	C	C	A	A	A	C	A	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48220976	NES11805110	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:48340838 () rs orientation: forward

Symbol	Name	Function Class
Tssr72617	transcription start site region 72617	669 bp downstream
Tssr72618	transcription start site region 72618	686 bp downstream
Tssr72619	transcription start site region 72619	695 bp downstream
Tssr72620	transcription start site region 72620	734 bp downstream