rs32847157 SNP Detail

Summary

• ID
  rs32847157
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:158565976 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACAGTACTC TGTCTTTGAT GGTTTTCAAC CACTTCAAAA
  GTAGCAACCT GGAACTAGGC AGATAGCTCA GTCAGTAAAG TATTTGCCTT GCAGACAGAG
  M
  GACCCGACTT TTATCTCCTG AGCCCCTCCC CCTTTTTAAA AAGCTGGGCG TGGGAGTATG
  CACTTATAAT CTTGGCGTTG GCAAAGACAG ACGGATCCC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45202382	mCV22655663	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	A	C
ss320590147	CHEV_2_158549792	CHEVERUD	SCREENING_POP	f	SNP						A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32847157					SNP	A	A	A	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:158565976 () rs orientation: forward

Symbol	Name	Function Class
Ppp1r16b	protein phosphatase 1, regulatory subunit 16B	Intron
Rr367352	regulatory region 367352	766 bp downstream
Rr367353	regulatory region 367353	500 bp downstream
Rr568829	regulatory region 568829	1500 bp distal
Rr568830	regulatory region 568830	within coordinates
Tssr21375	transcription start site region 21375	606 bp downstream
Tssr21376	transcription start site region 21376	589 bp downstream