rs32847266 SNP Detail

Summary

• ID
  rs32847266
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:152238730 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGCCTAGCTG GTAAGGCCTC
  ATTCCTCCAG AGGACCTGCG GTTACTGGGA CCTGTAGTTT CTTTTCAGAG GTTTCCAGAT
  TCCTCACAGT GCCATAGCTT CGCTGCCGCT ATGTACTTTT TGAACTAAGT ACATTAGCAT
  ACCCCAACAG GCAGGTGCCC CTTAAGACCA ACAAGTGTCA GGGAACCAAA CTAAGATGCT
  R
  GACCTGGCTT CTACTCCCCT GTAGCTTCTT TGACAGAAGT CTTGAAATTC TTCCACCCTA
  CAAAGTTGGT GCCTTGACCC TGGATACTTT GCGTGTTTTT GTTTGTTTGT TTATTGTTTG
  TTGTTTTTGT TTATTGTTTT GTTTTGTTTT TGTATGGCTC CTACGTCAAA TGCCTCTGAG
  TCGGTACCAA CTCGGCCAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	WSB/EiJ
ss46736871	NES10986635	PERLEGEN	MM_PANEL2	f	SNP	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	WSB/EiJ
rs32847266					SNP	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46736871	NES10986635	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152238730 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15395	CpG island 15395	1719 bp distal
Cpgi15396	CpG island 15396	135 bp distal
Espn	espin	1902 bp upstream
Rr398896	regulatory region 398896	192 bp downstream
Rr605762	regulatory region 605762	1552 bp distal
Rr605763	regulatory region 605763	1432 bp distal
Rr605764	regulatory region 605764	within coordinates
Rr605765	regulatory region 605765	282 bp distal
Rr605766	regulatory region 605766	913 bp proximal
Rr605767	regulatory region 605767	1225 bp proximal
Tssr44823	transcription start site region 44823	1876 bp upstream