rs32848299 SNP Detail

Summary

• ID
  rs32848299
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:82070313 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGGT GATGCGAGAA CCAGAGGCAC
  M
  GGTGTTTGCC CCTCTCCACC TTTGA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46199850	mCV23366346	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	C
ss322727475	CHEV_8_83867583	CHEVERUD	SCREENING_POP	f	SNP					A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32848299					SNP	A	C	C	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:82070313 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20635	CpG island 20635	651 bp distal
Gm51582	predicted gene, 51582	1021 bp upstream
Inpp4b	inositol polyphosphate-4-phosphatase, type II	within coordinates
Rr666047	regulatory region 666047	2000 bp distal
Rr666048	regulatory region 666048	1112 bp distal
Rr666049	regulatory region 666049	within coordinates
Tssr78167	transcription start site region 78167	1174 bp downstream
Tssr78168	transcription start site region 78168	1139 bp downstream
Tssr78169	transcription start site region 78169	1109 bp downstream
Tssr78170	transcription start site region 78170	1067 bp downstream
Tssr78171	transcription start site region 78171	966 bp downstream