rs32848477 SNP Detail

Summary

• ID
  rs32848477
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:48341670 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGTTGCAA AGAGAAGCGT
  CTCTTGAGTC AGTAGTCAAT ATGAAATAGT TGTAGCACAG AGACTGCAGT GAAAACTGGT
  ACTTGAGGGA GGATAATCAA GAGGGGAAAA AATACCTGTA GTTTGCTGTA CTTGGATCTG
  CCCTGCATGT CATTCCTTTG AGTCATGCTC TTCACAAGCC TGTTCTCAAG ATTGGCCTGG
  M
  TCCTATCTCT TGTACTCTGA TCACACCAAC CCCTATGATT CCTCTTCCCA CTTCTGGATG
  TTGTTGTTGT TGTTGTTTAA CTTCTTGCAT ACAGAAGGTG AGGAATGACA AGGAATGTGT
  AGCATTATTT GGGTATCAGG CATACCTTTA TGTTTGTAAA GCTATACAAT GATAAAGCAA
  TAAACATAAA GATTATGATA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48220992	NES11805118	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32848477					SNP	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48220992	NES11805118	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:48341670 () rs orientation: forward

Symbol	Name	Function Class
Tssr72617	transcription start site region 72617	148 bp upstream
Tssr72618	transcription start site region 72618	141 bp upstream
Tssr72619	transcription start site region 72619	115 bp upstream
Tssr72620	transcription start site region 72620	93 bp upstream