rs32849832 SNP Detail

Summary

• ID
  rs32849832
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:153472915 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTCCTGAAAA CCTCTCACTG GGGCCTCAGA GACACTGGCA AGTTCCAGGC TACCTGGACC
  ACAGAGTGAG ACCTTACATC CAGGAACAAA TAAACCAGTC CCCAGCAGAG AGAATGAGGC
  AGGAGAATCA CAAACTTGTA GTCTAGGCTA CATGGCTAAA TTATTTATTT ATTTATTTAT
  TTATTTATTT ATTTATTAAA GAGCTGACTG AGCCTGTTGG CACAGGTATA TAAATTCAGG
  TCCTCAGGAG GTTGAGGAAG GAGGATTATA AATTCAAGGC CAGACTGAGC AAATTATTGA
  R
  AATGGGACTC AAACAAGGCC AGGCATAATG AATGGTACAC GCCTAGAATC CTAGCCTTGG
  AAGGCAGAGT GGAGGATGGT TTTTAGTTCC ATACCAGTCA GGGTTACAAG ACCTTATCTA
  AAAATAAAAG AGAAAACCAC AACAGCAAGC CACCACACAG AACCTAGTGG GGATTAATAG
  ATATCTGACC ACAGTGTCAC ACACCTGGAA TCGCAGCACT TGGGGAAGCT GAGGCAGGGA
  GAACTTAAAT CTGAAGACAG CCAGGGGACA GAGAGACTGT CTCAAAGCCA AAAAAGAAAA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45202882	mCV23862288	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss147999430	ENSMUSSNP4000726	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32849832					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153472915 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Commd7	COMM domain containing 7			Intron
				Noncoding-Transcript-Variant
Cpgi12491	CpG island 12491			1303 bp proximal
Rr567709	regulatory region 567709			539 bp distal
Rr567710	regulatory region 567710			1735 bp proximal
Tssr26915	transcription start site region 26915			1684 bp downstream
Tssr26916	transcription start site region 26916			1780 bp downstream