GAGCT ATGGTAAATA TGTTAAATAT R CACTCCCCCC AAGTCTATTT TCTCT R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|
ss45702666 | mCV22807790 | ABI | CRAMUS_MOUSE | f | SNP | G | G | G | A | ||
ss147850338 | ENSMUSSNP2061759 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | G | A | |||
ss321413244 | CHEV_4_144844205 | CHEVERUD | SCREENING_POP | f | SNP | G | A | ||||
SNP Consensus Information | |||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
||||
rs32851067 | SNP | G | G | G | A | G | A |
Location: Chr4:144980872 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr398674 | regulatory region 398674 | 245 bp upstream | ||||||
Rr604348 | regulatory region 604348 | 26 bp proximal | ||||||
Tssr40207 | transcription start site region 40207 | 428 bp upstream | ||||||
Tssr44535 | transcription start site region 44535 | 134 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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