rs32851475 SNP Detail

Summary

• ID
  rs32851475
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:98588527 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAGGCACGT CCAGAGGTAA
  GCACCATTTT AGGAGCATTC TGTACTGTGA AATGTACTAG CTACAAAATA GAAATTAAGT
  GTACAATAAT AAAGCATTAA AATAAAATGA ACACAGACTA CATGTTTTAT TAGGTCAGAT
  GGTACAGACT GTCTATACAT AATTGTTTTT ATTTATGTTA CCACCCCAGA GGCTTAGAAA
  Y
  CATACAACTA GAGAGATCTA ACTAAACCAT TAAAATAAGA GAAGAGCAGG CTGGGGAGTT
  GATTGGCTCA GTAGTTAGAA GCATGTCTTG CTCTTACAAA GGGTTGGAGT TCGAGCCCAG
  TACGAACCAC AACTGCCTGA AACTCTAGTT CTAGGAGACT CAAGTCCTCA TCTGGACTCT
  GGAGACACAC ACAAGTGCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47222725	NES11204831	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32851475					SNP	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47222725	NES11204831	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:98588527 () rs orientation: forward

Symbol	Name	Function Class
Rr387680	regulatory region 387680	494 bp upstream
Rr470931	regulatory region 470931	980 bp distal