rs32851962 SNP Detail

Summary

• ID
  rs32851962
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:34486412 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAATG GCCATGGATG CTTACTGAGG
  Y
  TTGTATGTAG TGTTGGTTAC TGGGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss45703497	mCV22883064	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss146172208	ENSMUSSNP3554005	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs32851962					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:34486412 () rs orientation: forward

Symbol	Name	Function Class
Gm12350	predicted gene 12350	119 bp downstream
Gm33434	predicted gene, 33434	821 bp upstream
Rr590219	regulatory region 590219	534 bp distal
Tssr36763	transcription start site region 36763	646 bp downstream
Tssr36764	transcription start site region 36764	632 bp downstream
Tssr36765	transcription start site region 36765	615 bp downstream