rs32853179 SNP Detail

Summary

• ID
  rs32853179
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132900972 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AATCTCCTTT CTACCCCTCA TATTTATTTT ACTTTTATCT
  TTATTTTCTG TATGTGGGTG TTTGGCCTGC ATATGTGTCT GTGCACTGTG TGAGTACAAT
  K
  CCCTCAGAGG CCAGAAGAAG GTGGGTTCTG GGACTCGAAC CCCTGTCTGT TCTGAGGTTT
  TTCTCCAGCT CCAGAAATGT TTTTTGTTTG TATTGAAGC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45703511	mCV24818602	ABI	CRAMUS_MOUSE	f	SNP		T	G	T
ss147484333	ENSMUSSNP5744290	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32853179					SNP	T	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132900972 () rs orientation: forward

Symbol	Name	Function Class
Gm55379	predicted gene, 55379	1947 bp upstream
Gm69072	predicted gene, 69072	within coordinates
Rr367728	regulatory region 367728	645 bp upstream
Rr601217	regulatory region 601217	508 bp proximal
Tssr1326	transcription start site region 1326	968 bp downstream
Tssr39456	transcription start site region 39456	810 bp upstream
Tssr39457	transcription start site region 39457	864 bp upstream
Tssr39458	transcription start site region 39458	878 bp upstream
Wasf2	WASP family, member 2	within coordinates