rs32854254 SNP Detail

Summary

• ID
  rs32854254
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:121268627 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAGG TGCAGGCAAG AGATCTCAAG
  Y
  TCAAGATCTT CCATGGCTAC ATAGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45203727	mCV22586275	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss147386138	ENSMUSSNP5108014	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C
ss320483165	CHEV_2_121263882	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32854254					SNP	C	C	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:121268627 () rs orientation: forward

Symbol	Name	Function Class
Ell3	elongation factor RNA polymerase II-like 3	881 bp downstream
Pdia3	protein disulfide isomerase associated 3	within coordinates
Tssr19768	transcription start site region 19768	1782 bp downstream
Tssr19769	transcription start site region 19769	500 bp downstream
Tssr19770	transcription start site region 19770	200 bp downstream