rs32854654 SNP Detail

Summary

• ID
  rs32854654
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:91258882 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCGTT AAGTTTTGAC ACTGGGCTAC
  R
  CTTTTTGTTT TTTGGTTTTT TTTAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45703835	mCV23976698	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss146983075	ENSMUSSNP6053183	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32854654					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:91258882 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14444	CpG island 14444	262 bp proximal
Elavl2	ELAV like RNA binding protein 1	within coordinates
Rr595258	regulatory region 595258	250 bp proximal
Rr595259	regulatory region 595259	1000 bp proximal
Rr595260	regulatory region 595260	1379 bp proximal
Tssr42416	transcription start site region 42416	1301 bp downstream
Tssr42417	transcription start site region 42417	1339 bp downstream
Tssr42418	transcription start site region 42418	1383 bp downstream