rs32854967 SNP Detail

Summary

• ID
  rs32854967
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:68516337 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAATT CAGACAGAGC TTCATATAGG
  Y
  TGGAAGGTGA AAGACTTAAC TTACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46201510	mCV22628461	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss145062374	ENSMUSSNP273484	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss322687927	CHEV_8_70587584	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32854967					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:68516337 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20399	CpG island 20399	585 bp distal
Psd3	pleckstrin and Sec7 domain containing 3	within coordinates
Rr664367	regulatory region 664367	1469 bp distal
Rr664368	regulatory region 664368	968 bp distal
Tssr81475	transcription start site region 81475	1341 bp upstream
Tssr81476	transcription start site region 81476	1181 bp upstream