rs32855135 SNP Detail

Summary

• ID
  rs32855135
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:64698287 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTAG TAAGTGCTTG TCTAGCTAGC
  R
  TAAAGCCCTG GCCATGTCTC AAACG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss46300131	mCV25282065	ABI	CRAMUS_MOUSE	f	SNP	A	A	G		A		A
ss47722466	NES11315810	PERLEGEN	MM_PANEL2	f	SNP				A		G	A	A	G	G	A
ss136565257	ENSMUSSNP658443	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs32855135					SNP	A	A	G	A	A	G	A	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47722466	NES11315810	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:64698287 () rs orientation: forward

Symbol	Name	Function Class
Rr401455	regulatory region 401455	1273 bp downstream
Rr681316	regulatory region 681316	1151 bp distal
Rr681317	regulatory region 681317	within coordinates
Rr681318	regulatory region 681318	259 bp proximal
Rr681319	regulatory region 681319	1062 bp proximal
Tssr2909	transcription start site region 2909	195 bp upstream
Tssr85622	transcription start site region 85622	1348 bp downstream
Tssr85623	transcription start site region 85623	1328 bp downstream
Tssr85624	transcription start site region 85624	38 bp downstream
Tssr90157	transcription start site region 90157	177 bp upstream