rs32855137 SNP Detail

Summary

• ID
  rs32855137
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:64699043 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTTTGCTT CAACACAGAG
  GAAGGAGGAA CCTTGCTTGC TTGCCCTTGT GAAAACCACA ATAAATACTT GTATCTTTAT
  TTATTTCTTT TCTTCCTTTT CTTTTTTCCT CCCTCCTTCC CTTCCTCCTC CTCCTCCTTT
  CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTGCCACATC TTCAGTCCCT TCTCATTTTT
  Y
  TTCCTTGATG GAAATCATCG GTAAGCTGGG ATACATTGCC ACACTTTTTT TTTTCTTTGC
  AGTGGTATTG AAAGAATGTA GGAGACTGGA TGAAAGAATG TGAGGGACTG GATCCAAAGA
  GTCTGGCCCA AACCAAATAA TTTGGACCAC AAAGCTAGAC TGGTTTTTCC TATTTCTCAA
  AATAACTGGG ACAGACTGCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss47722468	NES11315812	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs32855137					SNP	T	T	T	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47722468	NES11315812	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:64699043 () rs orientation: forward

Symbol	Name	Function Class
Rr681316	regulatory region 681316	1907 bp distal
Rr681317	regulatory region 681317	749 bp distal
Rr681318	regulatory region 681318	104 bp distal
Rr681319	regulatory region 681319	306 bp proximal
Tssr2909	transcription start site region 2909	951 bp upstream
Tssr85624	transcription start site region 85624	794 bp downstream
Tssr90157	transcription start site region 90157	933 bp upstream