rs32855718 SNP Detail

Summary

• ID
  rs32855718
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:15078507 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGCG TGCTCTTCAA CTACCTCTTC
  S
  TGGCGGGCGG TGTGGCTCCT GCGGG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46201422	mCV25113010	ABI	CRAMUS_MOUSE	f	SNP	G	C	G
ss148695732	ENSMUSSNP116257	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss322517335	CHEV_8_15028507	CHEVERUD	SCREENING_POP	f	SNP				C	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32855718					SNP	G	C	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:15078507 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20129	CpG island 20129	within coordinates
Gm37844	predicted gene, 37844	85 bp upstream
Kbtbd11	kelch repeat and BTB (POZ) domain containing 11	within coordinates
Rr660169	regulatory region 660169	1082 bp distal
Rr660170	regulatory region 660170	311 bp distal
Tssr76486	transcription start site region 76486	1331 bp downstream
Tssr76487	transcription start site region 76487	1301 bp downstream
Tssr76488	transcription start site region 76488	1158 bp downstream
Tssr76489	transcription start site region 76489	1120 bp downstream
Tssr76490	transcription start site region 76490	730 bp downstream
Tssr76491	transcription start site region 76491	524 bp downstream
Tssr76492	transcription start site region 76492	247 bp upstream
Tssr80488	transcription start site region 80488	844 bp upstream