rs32855992 SNP Detail

Summary

• ID
  rs32855992
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:96037200 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCCAGGACAG TCAGGGCTAC ACAGAGAAAC CCTGTCTTGA AAAACAAACA AAACAAAACA
  AAACAACAAA ACAAAACAAA AGAGGTGGAC CTTCGTTTAG GGGTAGGCTC AGCACCGGGC
  AAGTTTCTTT AAGAGAAGAA CTTGGAGTGT TTTCTTAAGT TCCTTGGTCC CTAATCAAGG
  AGCAGCAAAT CTTACAGGAC TCCAATAGGA CATTCTGAAT GACAGGTTTA GCATTTATGC
  AAATTTATGC AAATCATATG TCAATATATG CAAAAGAATA GACAGCCCCA GGATTCCAAA
  K
  CTTGGGATGT CTCACTCAAT TTCTGGGGGC TTTGGGATTC TGAGCGAAGC TTTCCTGACA
  GGGAGGGAGG CTGCGGTTCC GCCAGGTAGT AAGGTAGGGC AGAATGGGGG AGGGGTGGAG
  TATCACTTGC TAATCCCTAG CCTGCTGAGG CCACCACTCT GCCTGATCCC TGCCCTGACC
  CCAGAGCCTG GCTAATCTCC ACCCCTAAAG ACCAAAGACA GCGTGGTATC ATCTTCCCTG
  AGACTCATGG GGACAAGGTC CCCTCCAGGC TCCCAGGCAG CCCTGCTGCA GAGCCTGGGG
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46200578	mCV22582111	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T
ss144591585	ENSMUSSNP5502560	ENSEMBL	ENSEMBL_Sanger	r	SNP		A
ss145642361	ENSMUSSNP1859139	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32855992					SNP	T	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:96037200 () rs orientation: forward

Symbol	Name	Function Class
Rr178910	regulatory region 178910	1400 bp distal
Rr191307	regulatory region 191307	within coordinates
Spmip8	sperm microtubule inner protein 8	948 bp upstream
Tssr2665	transcription start site region 2665	1010 bp upstream
Tssr2666	transcription start site region 2666	1024 bp upstream
Tssr2667	transcription start site region 2667	1064 bp upstream