rs32857283 SNP Detail

Summary

• ID
  rs32857283
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:98588221 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATAACATAA AACCTTCATG
  GTCAGGAGAG AAAGCTCAGC AGGCAAAGAC ACTTGCCACC AAGCCTGATA GCCCAACAGT
  GGGAGGAGAA AGCTGGCCCT CTAACTCCAA CACACATGCT CTGATATGTG TGCACAGACA
  TACATACATA TATACATATG CACACATAAA TAAATACAGT GTTATTTAAA ATGTTAAATG
  Y
  CATAATAATA TTTTATAATA ACTCAATAAA AGCAATGATA GAGCTTTGAC CTTTTGTCTC
  TTGTGTCACT TTTCTGCATT CAGTGGATAA TTTTCACTGA CACTTCTAGG CACGTCCAGA
  GGTAAGCACC ATTTTAGGAG CATTCTGTAC TGTGAAATGT ACTAGCTACA AAATAGAAAT
  TAAGTGTACA ATAATAAAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47222719	NES11204829	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs32857283					SNP	T	T	T	T	T	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47222719	NES11204829	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:98588221 () rs orientation: forward

Symbol	Name	Function Class
Rr387680	regulatory region 387680	800 bp upstream
Rr470931	regulatory region 470931	674 bp distal