rs32857918 SNP Detail

Summary

• ID
  rs32857918
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134290527 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTCCTCTGCC AGCTGGTGAC GGCTTCGGGT GACACTGTTG GAGGATTTTT CTCCCAGGAG
  CCTCTGGTGG CCAATGAGTC CAATCTGATT TCTTATTCAA TGAAATCCTT TATTCTACTT
  CACATATTTC TCCATTACAG TAATGAAAAT AGCATTATTA GTGATTTGTA ACATTTGGGA
  CCAAAGCAAA GGGGACTGTC TCCTCCGATG ACAGGGTAGA TGACAAGAAG TGGGACAGAA
  TCAATGTCGG GTGATAGGCA TTAAAAGCAG ACGGGTCAAG AGTGTGTGTG GTGTGTGTGG
  K
  GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT ACAAACACTA AAGGTCTCCT
  TGAGTTAGGT GGCGCCACTT TAGAAGGTAC ATGATTCTGA AAATTATAAT TGTCATAAAA
  CTCAAGTGGG GAGAAAGAAA AAAAACAAGG AAGGTCAAGC AAAACCGAAC TCCCTAAACC
  AAAAAGGAAA CCGAACCAAA TACACAAGAT GGGAACGCAA ACTTCCAGTC CTTTGGCCCA
  GGGACAGCAA GTGTGGGGAC ACAGAAATTC CCCCATAGAA AGGAACGTGT AGGCGCCAGG
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45703572	mCV24789236	ABI	CRAMUS_MOUSE	f	SNP	G	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs32857918					SNP	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134290527 () rs orientation: forward

Symbol	Name	Function Class
Man1c1	mannosidase, alpha, class 1C, member 1	within coordinates
Tssr43917	transcription start site region 43917	108 bp downstream
Tssr43918	transcription start site region 43918	123 bp downstream
Tssr43919	transcription start site region 43919	151 bp downstream
Tssr43920	transcription start site region 43920	219 bp downstream
Tssr43921	transcription start site region 43921	227 bp downstream
Tssr43922	transcription start site region 43922	261 bp downstream