rs32861131 SNP Detail

Summary

• ID
  rs32861131
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:181223313 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCGCCAGGT GCAACTTTGC GCTCAATTTC GACGAACTCA
  GAAGGTCGAA CACGCCTACC GCCCAGCTGG GGGCCCAGAG CCAAGTGCGC ACCCACTAGG
  R
  ACAGAGACCC ACGCTAAAGA TGTCAAACAG GTTTCCATTC TCAGTGCCTC CAAAAGCTGG
  AGCTTGGGCC AGTTCCGCCT TCCGTCCGCT GGGGCCCTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45204329	mCV23780464	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A	G
ss148402282	ENSMUSSNP807931	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32861131					SNP	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:181223313 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12930	CpG island 12930	within coordinates
Rr397593	regulatory region 397593	133 bp downstream
Rr573038	regulatory region 573038	within coordinates
Rr573039	regulatory region 573039	283 bp distal
Rr573040	regulatory region 573040	478 bp proximal
Rr573041	regulatory region 573041	983 bp proximal
Tssr22328	transcription start site region 22328	1995 bp downstream
Tssr22329	transcription start site region 22329	1967 bp downstream
Tssr22330	transcription start site region 22330	1953 bp downstream
Tssr28213	transcription start site region 28213	351 bp upstream
Tssr28214	transcription start site region 28214	380 bp downstream
Tssr28215	transcription start site region 28215	454 bp downstream
Tssr28216	transcription start site region 28216	476 bp downstream
Uckl1	uridine-cytidine kinase 1-like 1	within coordinates
Uckl1os	uridine-cytidine kinase 1-like 1, opposite strand	within coordinates
Zfp512b	zinc finger protein 512B	612 bp downstream