rs32861466 SNP Detail

Summary

• ID
  rs32861466
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:64734193 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GACAGGCTC TCTACTTTGG ATCATTGCAC
  AACTTTCTCA GTCTTACTTT AAAAAAAAAA AAAACTCTTT TAGATTTACT TTATTGGAAA
  ATGAACAGAA CTAAGGGAGG TGTGCCTATA GCACTCTCCT GAGAGGGTGA AATGGGGATG
  Y
  GGCCAGAGAG ATGATGGCTG TAAAAACAAG CCCAAGGGGC TGGGAAGGTG GCACCATGCA
  TGTAccagtt tccactccat ttcccctgcc tcttcccatt agagctcctc caaggatgac
  tgtgcttcct cacttcccat ggtcttcttc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46304926	mCV25282375	ABI	CRAMUS_MOUSE	f	SNP		C					T	T
ss47722702	NES11313538	PERLEGEN	MM_PANEL2	f	SNP	T	C	T	T	T	C		T	T		C	T	T		T
ss136565458	ENSMUSSNP5114021	ENSEMBL	ENSEMBL_Sanger	f	SNP		C						T
ss322985942	CHEV_9_64674718	CHEVERUD	SCREENING_POP	f	SNP										C				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	DBA/2J	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs32861466					SNP	T	C	T	T	T	C	T	T	T	C	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47722702	NES11313538	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:64734193 () rs orientation: forward

Symbol	Name	Function Class
Dennd4a	DENN domain containing 4A	within coordinates
Rr201294	regulatory region 201294	8 bp proximal
Rr210200	regulatory region 210200	1209 bp proximal