rs32862030 SNP Detail

Summary

• ID
  rs32862030
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134643908 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAGC CAAAGCTCCT TCTTCTTTGC
  R
  TTGTCTCTAC TTCTTTACTG GCTGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45704956	mCV22753227	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss147538667	ENSMUSSNP5596985	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss321349950	CHEV_4_134472512	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs32862030					SNP	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134643908 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15052	CpG island 15052	1385 bp distal
Rr367743	regulatory region 367743	1885 bp upstream
Tmem50a	transmembrane protein 50A	1601 bp upstream
Tssr39578	transcription start site region 39578	1478 bp downstream
Tssr43943	transcription start site region 43943	1624 bp upstream
Tssr43944	transcription start site region 43944	1588 bp upstream
Tssr43945	transcription start site region 43945	1578 bp upstream
Tssr43946	transcription start site region 43946	1769 bp downstream